Table 2 Top significant differentially expressed genes (DEGs) in Solanum tuberosum following application of Quantis™ shown with their A. thaliana gene orthologues, and respective A. thaliana mutants. Percentage (%) identity to the transcript (S. tuberosum) gene ID is included
Solanum tuberosum gene ID | Description | log2fold change | Padja | % Query cover | % identityb | A. thaliana orthologue | NASC IDc |
|---|---|---|---|---|---|---|---|
PGSC0003DMG400014013 | Flavonoid 3-hydroxylase | 1.54 | 4.11E-02 | 99 | 37.81 | AT4G36220 | N575876 |
PGSC0003DMG400021331 | Penetration 1 | 1.43 | 4.49E-02 | 84 | 76.98 | AT3G11820 | N666629 |
PGSC0003DMG400014776 | Tyramine hydroxycinnamoyl transferase | 1.41 | 6.72E-03 | 94 | 36.06 | AT2G39030 | N567947 |
PGSC0003DMG400019437 | Pathogen- and wound-inducible antifungal protein CBP20 | 1.32 | 1.14E-02 | 84 | 73.55 | AT3G04720 | N666544 |
PGSC0003DMG400019435 | Wound-induced protein WIN1 | 0.84 | 1.20E-03 | 96 | 66.15 | AT3G04720 | N666544 |
PGSC0003DMG400020844 | Seed dormancy, maternal effect | 0.58 | 3.04E-05 | 96 | 40 | AT4G37300 | N664015 |