Table 1 Sequencing statistics for the 24-transcriptome data of Atl and Q9 potato at four time points when infected with P. infestans
From: Transcriptome analysis reveals various genes involved in the regulation of potato to late blight
Sample | Clean Data | Clean Data Ratio (%) | Clean Data Q30 (%) | Mapped reads (%) | Uniquely mapped reads (%) |
|---|---|---|---|---|---|
QC-1 | 54,952,282 | 96.16 | 93.23 | 82.92 | 71.63 |
QC-2 | 37,123,122 | 96.08 | 93.43 | 86.14 | 76.21 |
QC-3 | 46,037,702 | 96.13 | 93.33 | 84.54 | 73.92 |
Q1-1 | 37,800,336 | 96.69 | 93.59 | 88.78 | 75.89 |
Q1-2 | 43,299,476 | 96.69 | 93.95 | 90.49 | 72.98 |
Q1-3 | 40,549,906 | 96.69 | 93.76 | 89.64 | 74.46 |
Q2-1 | 36,029,832 | 96.08 | 93.84 | 87.97 | 78.57 |
Q2-2 | 38,688,838 | 96.9 | 93.71 | 89.92 | 80.91 |
Q2-3 | 40,543,594 | 96.83 | 93.41 | 90.4 | 81.39 |
Q3-1 | 49,063,786 | 95.6 | 93.12 | 89.69 | 24.24 |
Q3-2 | 47,625,928 | 96.45 | 93.8 | 91.17 | 42.75 |
Q3-3 | 48,463,774 | 96.43 | 93.38 | 69.51 | 32.18 |
AC-1 | 36,757,412 | 96.43 | 93.53 | 87.67 | 76.98 |
AC-2 | 45,366,794 | 96.21 | 93.18 | 86.18 | 76.84 |
AC-3 | 34,646,712 | 96.27 | 93.32 | 87.63 | 77.35 |
A1-1 | 38,829,654 | 95.5 | 93.29 | 85.49 | 71.46 |
A1-2 | 46,774,418 | 96.23 | 92.98 | 88.15 | 77.46 |
A1-3 | 42,802,036 | 95.87 | 93.15 | 86.82 | 74.46 |
A2-1 | 40,839,744 | 95.55 | 92.88 | 85.84 | 74.29 |
A2-2 | 41,672,806 | 96.18 | 93.81 | 88.59 | 77.8 |
A2-3 | 40,167,408 | 96.2 | 93.59 | 83.7 | 73.05 |
A3-1 | 34,750,778 | 95.92 | 93.72 | 79.52 | 67.49 |
A3-2 | 30,793,670 | 96.38 | 93.83 | 85.53 | 75.6 |
A3-3 | 32,772,224 | 96.15 | 93.78 | 82.55 | 71.57 |