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Table 1 Singletons occurring in Bacillus amyloliquefaciens subsp. plantarum (15 genomes), but not in Bacillus amyloliquefaciens subsp. amyloliquefaciens

From: Stimulation of plant growth and biocontrol by Bacillus amyloliquefaciens subsp. plantarum FZB42 engineered for improved action

Accession number Description BS gene Identity (%) Classa
RBAM_001770 DinB family; cl17821 YizA BSU10800 49 6.7
RBAM_002650 GH25 muramidase YbfG BSU02200 83 1.1
RBAM_002660 Unknown protein    6.7
RBAM_003280 Alpha-amylase AmyE BSU03040 87 2.2
RBAM_003370 Putative antimicrobial peptide Lci    4.3
RBAM_004550 8-oxo-dGTP diphosphatase BSU04330 60 3.1
RBAM_004640 Unknown protein    6.7
RBAM_005260 Proline/betaine transporter, MFS superfamily    1.2
RBAM_005610 Cation exporter TrkA, CzcD BSU26640 89 1.2
RBAM_005640 4-Hydroxy-tetrahydrodipicolinate synthase NP_389559 25 2.6
RBAM_006120 Unknown protein NP_389102 43 6.7
RBAM_008480 Phosphoenolpyruvate synthase, PPDK_N NP_389764 30 2.2
RBAM_010040 DNA alkylation repair enzyme, COG4335 YhaZ BSU09810 63 3.1
RBAM_012380 Uronate isomerase (glucuronate isomerase) UxaC BSU12300 77 2.2
RBAM_012390 Symporter, sugar (glycoside-pentoside-hexuronide) transporter BSU12310 80 2.2
RBAM_013540 Oxidoreductase, NADB_Rossmann BSU13770 97 6.6
RBAM_014340 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014350 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014360 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014370 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014390 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014400 Macrolactin synthesis; polyketide synthase of type I    4.3
RBAM_014410 Macrolactin synthesis; putative penicillin binding protein    4.3
RBAM_017950 2-keto-3-deoxygluconokinase KdgK BSU22110 30 2.2
RBAM_017960 Zinc-type alcohol dehydrogenase, Zn_ADH7 YjmD BSU12330 77 2.2
RBAM_017970 2-keto-3-deoxygluconate-6-phosphate aldolase KdgA BSU22100 41 6.2
RBAM_017990 d-mannonate oxidoreductase, NADB_Rossmann BSU12350 74 2.2
RBAM_018000 Negative transcriptional regulator (LacI family) KdgR BSU22120 34 3.4
RBAM_018100 Endo-1,4-beta-glucanase, glycoside hydrolase family 5 BSU18130 93 2.2
RBAM_018230 H+/gluconate symporter and related permeases BSU40050 81 3.4
RBAM_019040 Hypothetical protein, DUF4025 YP_054581 50 6.7
RBAM_019290 Hypothetical protein YoaQ BSU18700 68 4.2
RBAM_020240 Isochorismatase, cystein hydrolase BSU26760 93 6.7
RBAM_021810 Involved in biosynthesis of extracellular polysaccharides BSU23680 65 2.2
RBAM_021880 Metalloprotein with Zn binding site YqjT BSU23750 76 6.7
RBAM_021970 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_021980 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_021990 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_022000 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_022010 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_022030 Difficidin synthesis; modular polyketide synthase of type I    4.3
RBAM_022050 Difficidin synthesis; acyl-CoA synthetase    4.3
RBAM_022060 Probable acyl carrier protein    4.3
RBAM_022070 Difficidin synthesis    4.3
RBAM_022090 Putative transcription terminator/antiterminator, NGN KOW BSU01010 26 3.2
RBAM_026190 Hypothetical protein YjdF    6.7
RBAM_028450 Isochorismatase hydrolase, cysteine hydrolase    
RBAM_030020 Putative transcriptional regulator (LysR family), HTH_PBP2_LTTR YybE BSU40670 31 3.4
RBAM_030030 Putative acetoacetate decarboxylase    
RBAM_030040 Uncharacterized oxidoreductase, ApbA ApbA_C ykpB 23 6.6
RBAM_033310 Putative endonuclease V, DNA repair enzyme ywqL 85  
RBAM_034390 ABC transporter permease, COG1284 (2xDUF161) NP_388993 30  
RBAM_037270 Cupin (JmjC) domain protein, cupin 8    
RBAM_037280 ABC transporters with duplicated ATPase UuP NP_388476 33  
RBAM_037810 Hypothetical protein 2xDUF1529    6.7
  1. aFunctional classes: 1.1 cellular processes/cell envelope, 1.2 cellular processes/transporters, 2.2 metabolism/carbon metabolism, 2.6 metabolism/additional metabolic pathways, 3.1 information processing/genetics, 3.2 information processing/RNA synthesis and degradation, 3.4 information processing/regulation of gene expression, 4.2 lifestyles/sporulation, 4.3 lifestyles/coping with stress, 6.2 groups of genes/membrane proteins, 6.6 groups of genes/poorly characterized/putative enzymes, 6.7 groups of genes/genes of unknown function.