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Table 2 Results of the MALDI biotyping of selected isolates of the autochthonous microbiota of Batavia lettuce rhizo- and phyllosphere

From: Application of MALDI-TOF mass spectrometry and specific PCR for tracking of E. coli O157:H strain 431/97 in Batavia lettuce

Isolate number Source Matched pattern Score value
Identification at species level
 4b R Enterobacter cloacae 13159_1 CHB 2.208
 16 P Pseudomonas kilonensis DSM 1364T HAM 2.375
 32d R Pseudomonas koreensis 2_2 TUB 2.278
 34 R Pantoea agglomerans CCM 4413 CCM 2.557
 50 R Pseudomonas corrugata DSM 7228T HAM 2.072
 62 P Pseudomonas brassicacearum DSM 13227T HAM 2.457
 105 R Delftia acidovorans CCM 2410 CCM 2.296
 128 R Pseudomonas tolaasii LMG 2342T HAM 2.021
 161 R Achromobacter spanius LMG 5911T HAM 2.214
 238 R Achromobacter denitrificans DSM 30026T DSM 2.160
 240 R Achromobacter piechaudii DSM 11386 DSM 2.313
 243 R Pseudomonas thivervalensis DSM 13194T HAM 2.171
 253 R Variovorax paradoxus DSM 647 DSM 2.106
Identification at genus level
 29 R Citrobacter koseri 9553_1 CHB 1.997
 45 R Stenotrophomonas maltophila 10942 CHB 1.801
  1. R rhizosphere, P phyllosphere