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Table 1 Combining organic amendments with biocontrol agents for controlling soil-borne plant pathogens

From: Soil microbiota manipulation and its role in suppressing soil-borne plant pathogens in organic farming systems under the light of microbiome-assisted strategies

Organic amendmentBiocontrol agentTarget pathogen (fungi and oomycetes)Disease/host plantReferences
Fungi
 Wheat bran, peat mossTrichoderma harzianumSclerotium cepivorumWhite rot/AlliumAvila Miranda et al. [9]
 Vermicompost, neem cakeT. harzianumFusarium solani f. sp. melongeneaeFusarium wilt/EggplantBhadauria et al. [20]
 Vineyard pruning wasteT. harzianumFusarium oxysporum f. sp. melonisFusarium wilt/MelonBlaya et al. [23]
 Cow dungT. harzianumF. oxysporum
Sclerotium rolfsii
Foot rot/LentilHannan et al. [86]
 Green compost from pig manure, rice straw, alcohol, vinegarTrichoderma harzianum SQR T037Fusarium oxysporum f. sp. cucumerinumFusarium wilt/CucumberYang et al. [233]
 Fresh chicken manureTrichoderma asperellum
Trichoderma atroviridae
Macrophomina phaseolinaCharcoal rot/StrawberryDomínguez et al. [67]
 Farm yard manure and poultry manureTrichoderma viridaePythium sp., Rhizoctonia solani, Phytophthora sp., Fusarium sp.Damping off/TomatoJoshi et al. [111]
 Green compost from cork, grape, olive marc, and spent mushroomT. asperellumR. solaniDamping-off/CucumberTrillas et al. [210]
 Composted sawdust, potato waste, and rice strawT. harzianum
Penicillium oxalicum Chaetomium globosum
F. oxysporumFusarium wilt/LegumesHaggag and Saber [85]
Bacteria
 Compost from pig manure, canola cakeBacillus subtilis SQR 9F. oxysporum f. sp. cucumerinumFusarium wilt/CucumberCao et al. [35]
 Amino acid fertilizer from rapeseed meal fermentation, and compost from pig manureB. subtilisVerticillium dahliaeVerticillium wilt/CottonLang et al. [123]
 Amino acid fertilizer from rapeseed mealBacillus pumilus SQR-N43R. solaniDamping-off/CucumberHuang et al. [98]
 Compost from pig manure, canola cakeBacillus amyloliquefaciens W19Fusarium oxysporum f. sp. cubenseFusarium wilt/BananaWang et al. [221]
 Pig manure, rice strawB. amyloliquefaciensRalstonia solanacearumBacterial wilt/TomatoWei et al. [223]
 Farm yard manure, compost, poultry manure, press mud, vermicompost, and neem cakePseudomonas fluorescensPythium aphanidermatumDamping off/TomatoJayaraj et al. [107]
Fungi + Bacteria
 Neem cake, farm yard manure, and micronutrientT. viridae
P. fluorescens
B. subtilis
Lasiodiplodia theobromaePhysic nut collar and root rotLatha et al. [125]
 Mustard oil cakeP. fluorescens
Glomus sinuosum
Gigaspora albida
R. solaniRoot rot/BeanNeeraj [167]
 Olive mill wasteB. amyloliquefaciens
Burkholderia cepacia
V. dahliaeVerticillium wilt/OliveVitullo et al. [215]
 Compost from pig manure, canola cakeT. harzianum Paenibacillus polymyxaFusarium oxysporum f. sp. niveumFusarium wilt/WatermelonWu et al. [227]
 Commercial organic fertilizer made of compost from pig manure, canola cakeP. polymyxa
B. subtilis
Penicillium spp.
Aspergillus spp.
F. oxysporum f. sp. melonisFusarium wilt/MelonZhao et al. [239]
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