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Table 1 AFLP primer sequences, number of loci, and number of polymorphic loci

From: Assessment of the genetic variations of sago palm Metroxylon sagu in three regions of Sarawak, Malaysia using amplified fragment length polymorphism (AFLP) marker

Primer Code

Sequence (5ʹ–3ʹ)

No of loci

No of polymorphic loci

Percentage of polymorphic loci

E-ACG/M-CTT*

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CTT

891

891

100%

E-ACG/M-CAA

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CAA

839

839

100%

E-ACG/M-CAT

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CAT

1208

1208

100%

E-ACG/M-CAG

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CAG

360

360

100%

E-ACG/M-CTA

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CTA

1081

1081

100%

E-ACG/M-CAC

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CAC

1252

1252

100%

E-ACG/M-CTC

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + CTC

1269

1269

100%

E-ACG/M-GTC

/56-FAM/AGACTGCGTACCAATTC + ACG

GATGAGTCCTGAGTAA + GTA

956

956

100%

E-AAT/M-CTT

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CTT

1334

1334

100%

E-AAT/M-CAA

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CAA

826

826

100%

E-AAT/M-CAT

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CAT

1359

1359

100%

E-AAT/M-CAG

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CAG

1334

1334

100%

E-AAT/M-CTA

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CTA

1305

1305

100%

E-AAT/M-CAC

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CAC

1392

1392

100%

E-AAT/M-CTA

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + CTA

1235

1235

100%

E-AAT/M-GTC

/56-ROXN/AGACTGCGTACCAATTC + AAT

GATGAGTCCTGAGTAA + GTC

1592

1592

100%

E-ATG/M-CTT

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CTT

1212

1212

100%

E-ATG/M-CAA

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CAA

775

775

100%

E-ATG/M-CAT

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + GTC

1135

1135

100%

E-ATG/M-CAG

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CAG

1010

1010

100%

E-ATG/M-CTA

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CTA

1084

1084

100%

E-ATG/M-CAC

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CAC

1184

1184

100%

E-ATG/M-CTA

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + CTA

1016

1016

100%

E-ATG/M-GTC

/55-TAMK/AGACTGCGTACCAATTC + ATG

GATGAGTCCTGAGTAA + GTC

1440

1440

100%

E-AAC/M-CTT

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CTT

1407

1407

100%

E-AAC/M-CAA

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CAA

1099

1099

100%

E-AAC/M-CAT

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CAT

1209

1209

100%

E-AAC/M-CAG

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CAG

1333

1333

100%

E-AAC/M-CTA

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CTA

358

358

100%

E-AAC/M-CAC

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CAC

413

413

100%

E-AAC/M-CTC

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CTC

1016

1016

100%

E-AAC/M-GTC

5HEX/AGACTGCGTACCAATTC + AAC

GATGAGTCCTGAGTAA + CTC

1092

1092

100%

Total

  

35,016

100%

  1. E, EcoR; M, Mse1