Table 1 Number and length of unigenes
From: Olfactory proteins of Endoclita signifer larvae and their roles in host recognition
Quality index | The 12th larval head | The 5th larval head | |||||
|---|---|---|---|---|---|---|---|
Duplication 1 | Duplication 2 | Duplication 3 | Duplication 1 | Duplication 2 | Duplication 3 | ||
Raw reads | 50, 635, 098 | 45,975,844 | 49,019,202 | 50,644,410 | 50,847,054 | 54,178,160 | |
Clean reads | 49,654,820 | 45,050,796 | 48,011,990 | 50,008,250 | 50,046,390 | 53,312,984 | |
Q20 (%) | 98.17 | 98.17 | 98.19 | 97.83 | 97.92 | 97.84 | |
Q30 (%) | 94.6 | 94.61 | 94.67 | 93.65 | 93.95 | 93.77 | |
GC content (%) | 52.24 | 51.96 | 52.21 | 45.74 | 46.24 | 46.32 | |
Total transcripts number | 62,499 | ||||||
Total unigenes number | 48,699 | ||||||
Largest unigenes length (bp) | 63,226 | ||||||
Average unigenes length (bp) | 915 | ||||||
N50 of unigenes | 1666 | ||||||
BUSCO of unigenes | C:94.00% [S:91.60%; D: 2.40%] | ||||||